Midbara is located in the heart of the Arava near the village of "Tzukim", about 110 km (68 mi) north of Eilat. The compound is located on an area of tens of thousands of square meters (2.5 acres) facing the west, bordering the "Ashush" natural reserve, and overlooks the Tzofar river and the east of Mount Negev. Those arriving from the north should travel towards Eilat via Dimona, turn right into the village of "Tzukim," 8 km (5 mi) after the village of "Tzofar," and turn left before the entrance into the village towards Midbara and then follow the path up to the parking lot.

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